Software and Datasets
Links to Baker Lab Code, Data Files and More
Github (BakerLab)
- Aggregated Molecular Phenotype (AMP) Score code
- Structural-Based Connectivity and Phenotypic Evaluations (SCOPE) toolbox
- PMI Exercise Multiomic analyses
- Preeclampsia and gestational diabetes mellitus lipid analyses
ArcGIS
- PFAS monitoring in pine needles ToxPi*ArcGIS map (DOI: 10.1021/acs.est.1c06483)
Panorama Public Datasets
- PFAS LC-IMS-MS Skyline library (DOI: 10.1021/acs.est.2c00201)
- Human plasma LC-IMS-CID-MS Skyline lipid library (DOI: 10.1038/s41596-022-00714-6)
- Smoke inhalation lipidomics Skyline documents (DOI: 10.1021/acs.jproteome.1c00820)
- PFAS monitoring in pine needles Skyline documents (DOI: 10.1021/acs.est.1c06483)
- Protein-lipid membrane interactions data (DOI: 10.1039/D3SC01482G)
- PFAS in fish fillet data
- Amino acid–bile acid conjugates data (DOI: 10.1021/acs.analchem.3c03057)
MassIVE Raw Data
- Superoxide dismutase IMS-MS data (DOI: 10.3389/fchem.2021.614595)
- Exercise and myocardial infarction lipidomic data (DOI: 10.3390/biom11010040)
- Pregnancy disorder multi-omic data part 1, part 2 (DOI: 10.1039/d0mo00074d)
- Adeno-associated virus capsids data (DOI: 10.1021/jasms.3c00321)
- Exosomes released from senescent cells data
- Alzheimer’s disease multiomic data (DOI:10.1021/acs.jproteome.3c00604)
- Fecal microbiota transplant bile acid data